From 389e98a4fa0b9d1fde5343a62b64df3ca5ccbda9 Mon Sep 17 00:00:00 2001
From: Silvan Jegen <s.jegen@gmail.com>
Date: Thu, 17 Oct 2013 20:36:39 +0200
Subject: Initial commit

---
 README.md | 46 ++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 46 insertions(+)
 create mode 100644 README.md

(limited to 'README.md')

diff --git a/README.md b/README.md
new file mode 100644
index 0000000..ee8a2e9
--- /dev/null
+++ b/README.md
@@ -0,0 +1,46 @@
+# Introduction to the obo package
+
+This is a WIP for a go library for parsing [.obo files](http://www.geneontology.org/GO.format.obo-1_2.shtml). The library currently parses .obo files and returns either a channel to, or a slice of the [Term] stanzas contained in the files.
+
+The parsing of other stanza types is still under construction as are several of the key: value-pairs associated with the [Term] stanza. Please see the TODO section further below.
+
+
+
+# Examples
+
+Reading a .obo file into a slice of OboTermEntries
+
+
+```Go
+var obolist []*OboTermEntry
+var parentchildren map[string][]*OboTermEntry
+
+reader := bufio.NewReader(os.File("/path/to/file/file.obo"))
+obolist, parentchildren = ParseToSlice(*reader, parentchildren, obolist)
+
+```
+
+To parse the OboTermEntries and having them fed to a channel:
+
+```Go
+obochan := make(chan *OboTermEntry)
+var obolist []*OboTermEntry
+
+reader := bufio.NewReader(os.File("/path/to/file/file.obo"))
+obochan = ParseToChannel(*reader, obochan)
+
+for ent := range obochan {
+	obolist = append(obolist, ent)
+}
+
+```
+
+
+# TODO
+
+* Parsing of header data
+* Writing of .obo files
+* Parsing of [Typedef] stanzas
+* Parsing of [Instance] stanzas
+* Handling of several tags is still missing
+
-- 
cgit v1.2.1-18-gbd029