From 389e98a4fa0b9d1fde5343a62b64df3ca5ccbda9 Mon Sep 17 00:00:00 2001
From: Silvan Jegen <s.jegen@gmail.com>
Date: Thu, 17 Oct 2013 20:36:39 +0200
Subject: Initial commit

---
 obo_test.go | 94 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 94 insertions(+)
 create mode 100644 obo_test.go

(limited to 'obo_test.go')

diff --git a/obo_test.go b/obo_test.go
new file mode 100644
index 0000000..140f948
--- /dev/null
+++ b/obo_test.go
@@ -0,0 +1,94 @@
+/* See LICENSE file for copyright and license details. */
+
+package obo
+
+import (
+	"bufio"
+	"strings"
+	"testing"
+)
+
+func TestOboParsing(*testing.T) {
+	parentchildren := make(map[string][]*OboTermEntry)
+	obochan := make(chan *OboTermEntry)
+	var obolist []*OboTermEntry
+
+	s := `
+
+format-version: 1.2
+date: 17:11:2011 13:07
+saved-by: lschriml
+auto-generated-by: OBO-Edit 2.1-beta6
+default-namespace: symptoms
+
+[Typedef]
+id: part_of
+name: part_of
+
+[Term]
+id: SYMP:0000000
+name: cellulitis
+def: "Cellulitis is a musculoskeletal system symptom characterized as a diffuse and especially subcutaneous inflammation of connective tissue." [URL:http\://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=cellulitis]
+is_a: SYMP:0000891 ! musculoskeletal system symptom
+
+[Term]
+id: SYMP:0000001
+name: abdominal cramp
+is_a: SYMP:0000461 ! abdominal symptom
+
+[Term]
+id: SYMP:0000002
+name: abdominal distention
+is_a: SYMP:0000461 ! abdominal symptom
+
+[Term]
+id: SYMP:0000003
+name: acute enteritis in newborns
+is_obsolete: true
+
+[Term]
+id: SYMP:0000004
+name: arrested moulting
+is_obsolete: true
+[Term]
+id: SYMP:0000005
+name: ataxia
+def: "Ataxia is a neurological and physiological symptom characterized by an inability to coordinate voluntary muscular movements that is symptomatic of some nervous disorders." [URL:http\://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=ataxia]
+synonym: "uncoordination" EXACT []
+is_a: SYMP:0000410 ! neurological and physiological symptom
+
+[Term]
+id: SYMP:0000006
+name: backache
+def: "Backache is a pain occurring in the lower back." [URL:http\://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=backache]
+synonym: "back pain" EXACT []
+is_a: SYMP:0000099 ! pain
+
+[Term]
+id: SYMP:0000007
+name: bleeding
+def: "A general symptom that is characterized as an act, instance, or result of being bled or the process by which something is bled: as a the escape of blood from vessels." [url:http\://www.merriam-webster.com/medlineplus/bleeding]
+is_a: SYMP:0000567 ! general symptom
+
+[Term]
+id: SYMP:0000008
+name: blindness
+is_a: SYMP:0000320 ! vision symptom
+
+[Term]
+id: SYMP:0000009
+name: blister
+def: "Blister is a skin and integumentary tissue symptom characterized as a fluid-filled elevation of the epidermis." [url:http\://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=blister]`
+
+	stringreader1 := bufio.NewReader(strings.NewReader(s))
+	stringreader2 := bufio.NewReader(strings.NewReader(s))
+
+	obolist, parentchildren = ParseToSlice(*stringreader1, parentchildren, obolist)
+	obochan = ParseToChannel(*stringreader2, obochan)
+
+	for ent := range obochan {
+		obolist = append(obolist, ent)
+	}
+
+	Dump(obolist, parentchildren)
+}
-- 
cgit v1.2.1-18-gbd029